Projects
Our Previous and Current Contracts
FlyExpress: A platform to explore expression patterns of developmentally relevant genes in Drosohila embryogenesis.
PI: Dr. Sudhir Kumar
Database Management: Michael McCutchan
TimeTree: A public knowleedge-base for information on the evolutionary timescale of life.
PI: Dr. Sudhir Kumar
Database Management: Lin-Wei Wu
Personal Genomics: Use evolutionary approaches to understand disease mutations, including mutations related to Mendellian diseases, complex diseases, somatic cell cancers, etc.
PI: Dr. Sudhir Kumar
Sequence Mutation Analysis: Dr. Li Liu, Kristyne Gerold, Gregory McInnes
Database Management: Maxwell Sanderford
Plasmodium comparative genomics: Comparative genomics study for plasmodium genes using 454 technology.
PI: Dr. Ananias Escalante
Sequence Analysis: David Fisher, Dr. Li Liu, Gregory McInnes
Translation Enhancement Element: Discovery of translation enhancement elements using mRNA display and sequencing technologies.
PI: Dr. John Chaput
Sequence Analysis: Dr. Li Liu
Metagenomics: Develop novel algorithms to classify sequences from metagenomics data.
PI: Dr. Alan Filipski
Sequence Analysis: Glen Stecher
MPID Bioinformatics: Study evolutoinary optimization of MPID protein structures for crystallization. Develop project website.
PI: Dr. Petra Fromme
Co-PI: Dr. Banu Ozkan, Dr. Sudhir Kumar
Structure Analysis: Dr. Nevin Gerek
Website Development: Wayne Parkhurst
Computation Instrumentation for Evolutionary Medicine: Seek funds to expand ASU High Performance Computing resources, with the usage focused on evolutionary medicine study. An S10 grant proposal is currently under preparation.
PI: Dr. Sudhir Kumar
Grant Preparation: Dr. Li Liu
PI: Dr. Sudhir Kumar
Database Management: Michael McCutchan
TimeTree: A public knowleedge-base for information on the evolutionary timescale of life.
PI: Dr. Sudhir Kumar
Database Management: Lin-Wei Wu
Personal Genomics: Use evolutionary approaches to understand disease mutations, including mutations related to Mendellian diseases, complex diseases, somatic cell cancers, etc.
PI: Dr. Sudhir Kumar
Sequence Mutation Analysis: Dr. Li Liu, Kristyne Gerold, Gregory McInnes
Database Management: Maxwell Sanderford
Plasmodium comparative genomics: Comparative genomics study for plasmodium genes using 454 technology.
PI: Dr. Ananias Escalante
Sequence Analysis: David Fisher, Dr. Li Liu, Gregory McInnes
Translation Enhancement Element: Discovery of translation enhancement elements using mRNA display and sequencing technologies.
PI: Dr. John Chaput
Sequence Analysis: Dr. Li Liu
Metagenomics: Develop novel algorithms to classify sequences from metagenomics data.
PI: Dr. Alan Filipski
Sequence Analysis: Glen Stecher
MPID Bioinformatics: Study evolutoinary optimization of MPID protein structures for crystallization. Develop project website.
PI: Dr. Petra Fromme
Co-PI: Dr. Banu Ozkan, Dr. Sudhir Kumar
Structure Analysis: Dr. Nevin Gerek
Website Development: Wayne Parkhurst
Computation Instrumentation for Evolutionary Medicine: Seek funds to expand ASU High Performance Computing resources, with the usage focused on evolutionary medicine study. An S10 grant proposal is currently under preparation.
PI: Dr. Sudhir Kumar
Grant Preparation: Dr. Li Liu